Bonus HTC Exercise 3.1: Explore condor_q¶
The goal of this exercise is try out some of the most common options to the
condor_q command, so that you can view jobs effectively.
The main part of this exercise should take just a few minutes, but if you have more time later, come back and work on the extension ideas at the end to become a
condor_q program has many options for selecting which jobs are listed. You have already seen that the default mode is to show only your jobs in "batch" mode:
[email protected] $ condor_q
You've seen that you can view all jobs (all users) in the submit node's queue by using the
[email protected] $ condor_q -all
And you've seen that you can view more details about queued jobs, with each separate job on a single line using the
Did you know you can also name one or more user IDs on the command line, in which case jobs for all of the named users are listed at once?
[email protected] $ condor_q <USERNAME1> <USERNAME2> <USERNAME3>
To list just the jobs associated with a single cluster number:
[email protected] $ condor_q <CLUSTER>
For example, if you want to see the jobs in cluster 5678 (i.e.,
5678.1, etc.), you use
To list a specific job (i.e., cluster.process, as in 5678.0):
[email protected] $ condor_q <JOB.ID>
For example, to see job ID 5678.1, you use
You can name more than one cluster, job ID, or combination thereof on the command line, in which case jobs for all of the named clusters and/or job IDs are listed.
Let’s get some practice using
- Using a previous exercise, submit several
- List all jobs in the queue — are there others besides your own?
- Practice using all forms of
condor_qthat you have learned:
- List just your jobs, with and without batching.
- List a specific cluster.
- List a specific job ID.
- Try listing several users at once.
- Try listing several clusters and job IDs at once.
- When there are a variety of jobs in the queue, try combining a username and a different user's cluster or job ID in the same command — what happens?
Viewing a Job ClassAd¶
You may have wondered why it is useful to be able to list a single job ID using
condor_q. By itself, it may not be that useful. But, in combination with another option, it is very useful!
If you add the
-long option to
condor_q (or its short form,
-l), it will show the complete ClassAd for each selected job, instead of the one-line summary that you have seen so far. Because job ClassAds may have 80–90 attributes (or more), it probably makes the most sense to show the ClassAd for a single job at a time. And you know how to show just one job! Here is what the command looks like:
[email protected] $ condor_q -long <JOB.ID>
The output from this command is long and complex. Most of the attributes that HTCondor adds to a job are arcane and uninteresting for us now. But here are some examples of common, interesting attributes taken directly from
condor_q output (except with some line breaks added to the
MyType = "Job" Err = "sleep.err" UserLog = "/home/cat/intro-2.1-queue/sleep.log" Requirements = ( IsOSGSchoolSlot =?= true ) && ( TARGET.Arch == "X86_64" ) && ( TARGET.OpSys == "LINUX" ) && ( TARGET.Disk >= RequestDisk ) && ( TARGET.Memory >= RequestMemory ) && ( TARGET.HasFileTransfer ) ClusterId = 2420 WhenToTransferOutput = "ON_EXIT" Owner = "cat" CondorVersion = "$CondorVersion: 8.5.5 May 03 2016 BuildID: 366162 $" Out = "sleep.out" Cmd = "/bin/sleep" Arguments = "120"
Attributes are listed in no particular order and may change from time to time.
Do not assume anything about the order of attributes in
See what you can find in a job ClassAd from your own job.
- Using a previous exercise, submit a
sleepjob that sleeps for at least 3 minutes (180 seconds).
Before the job executes, capture its ClassAd and save to a file:
condor_q -l <JOB.ID> > classad-1.txt
After the job starts execution but before it finishes, capture its ClassAd again and save to a file
condor_q -l <JOB.ID> > classad-2.txt
Now examine each saved ClassAd file. Here are a few things to look for:
- Can you find attributes that came from your submit file? (E.g., Cmd, Arguments, Out, Err, UserLog, and so forth)
- Can you find attributes that could have come from your submit file, but that HTCondor added for you? (E.g., Requirements)
- How many of the following attributes can you guess the meaning of?
Why Is My Job Not Running?¶
Sometimes, you submit a job and it just sits in the queue in Idle state, never running. It can be difficult to figure out why a job never matches and runs. Fortunately, HTCondor can give you some help.
To ask HTCondor why your job is not running, add the
-better-analyze option to
condor_q for the specific job. For example, for job ID 2423.0, the command is:
[email protected] $ condor_q -better-analyze 2423.0
Of course, replace the job ID with your own.
Let’s submit a job that will never run and see what happens. Here is the submit file to use:
executable = /bin/hostname output = norun.out error = norun.err log = norun.log should_transfer_files = YES when_to_transfer_output = ON_EXIT request_disk = 10MB request_memory = 8TB queue
(Do you see what I did?)
- Save and submit this file.
condor_q -better-analyzeon the job ID.
There is a lot of output, but a few items are worth highlighting. Here is a sample from my own job (with some lines omitted):
-- Schedd: learn.chtc.wisc.edu : <22.214.171.124:9618?... ... Job 98096.000 defines the following attributes: RequestDisk = 10240 RequestMemory = 8388608 The Requirements expression for job 98096.000 reduces to these conditions: Slots Step Matched Condition ----- -------- ---------  11227 Target.OpSysMajorVer == 7  13098 TARGET.Disk >= RequestDisk  0 TARGET.Memory >= RequestMemory No successful match recorded. Last failed match: Fri Jul 12 15:36:30 2019 Reason for last match failure: no match found 98096.000: Run analysis summary ignoring user priority. Of 710 machines, 710 are rejected by your job's requirements 0 reject your job because of their own requirements 0 match and are already running your jobs 0 match but are serving other users 0 are able to run your job ...
At the end of the summary,
condor_q provides a breakdown of how machines and their own requirements match against my own job's requirements. 710 total machines were considered above, and all of them were rejected based on my job's requirements. In other words, I am asking for something that is not available. But what?
Further up in the output, there is an analysis of the job's requirements, along with how many slots within the pool match each of those requirements. The example above reports that 13098 slots match our small disk request request, but none of the slots matched the
TARGET.Memory >= RequestMemory condition. The output also reports the value used for the
RequestMemory attribute: my job asked for 8 terabytes of memory (8,388,608 MB) -- of course no machines matched that part of the expression! That's a lot of memory on today's machines.
The output from
condor_q -analyze (and
condor_q -better-analyze) may be helpful or it may not be, depending on your exact case. The example above was constructed so that it would be obvious what the problem was. But in many cases, this is a good place to start looking if you are having problems matching.
Bonus: Automatic Formatting Output¶
Do this exercise only if you have time, though it's pretty awesome!
There is a way to select the specific job attributes you want
condor_q to tell you about with the
-af option. In this case, HTCondor decides for you how to format the data you ask for from job ClassAd(s).
(To tell HTCondor how to specially format this information, yourself, you could use the
-format option, which we're not covering.)
To use autoformatting, use the
-af option followed by the attribute name, for each attribute that you want to output:
[email protected] $ condor_q -all -af Owner ClusterId Cmd moate 2418 /share/test.sh cat 2421 /bin/sleep cat 2422 /bin/sleep
Bonus Question: If you wanted to print out the
Requirements expression of a job, how would you do that with
-af? Is the output what you expected? (HINT: for ClassAd attributes like "Requirements" that are long expressions, instead of plain values, you can use
-af:r to view the expressions, instead of what it's current evaluation.)
As suggested above, if you want to learn more about
condor_q, you can do some reading:
- Read the
condor_qman page or HTCondor Manual section (same text) to learn about more options
- Read about ClassAd attributes in Appendix A of the HTCondor Manual